Restructure src/ modules with consistent internal organization

Reorganize major src/ directories to follow a consistent pattern with
core/, menu/, submenu/, inputs/, logs/, layout/, feedback/ subdirectories.

Changes by module:

- stores/: Move 5 store files to stores/core/
- utils/: Create core/ (terminal, tools, etc.) and menu/ (progress-bar)
- api/: Create copilot/core/, copilot/auth/, ollama/core/
- providers/: Create core/, copilot/core/, copilot/auth/, ollama/core/, login/core/
- ui/: Create core/, banner/core/, banner/menu/, spinner/core/,
       input-editor/core/, components/core/, components/menu/
- tools/: Create core/ for registry.ts and types.ts
- tui-solid/: Reorganize components/ into menu/, submenu/, inputs/,
              logs/, modals/, panels/, layout/, feedback/
- commands/: Create core/ for runner.ts and handlers.ts
- services/: Create core/ for agent.ts, permissions.ts, session.ts,
             executor.ts, config.ts

All imports updated to use new paths. TypeScript compilation verified.

src/commands/components/callbacks/on-tool-call.ts

@@ -1,5 +1,5 @@
 import { appStore } from "@tui/index.ts";
-import { isQuietTool } from "@utils/tools.ts";
+import { isQuietTool } from "@utils/core/tools";
 import type { ToolCallParams } from "@interfaces/ToolCallParams.ts";
 
 export const onToolCall = (call: ToolCallParams): void => {

src/commands/components/chat/agents/switch-agent.ts

@@ -3,7 +3,7 @@
  */
 
 import chalk from "chalk";
-import { errorMessage, infoMessage, warningMessage } from "@utils/terminal";
+import { errorMessage, infoMessage, warningMessage } from "@utils/core/terminal";
 import { agentLoader } from "@services/agent-loader";
 import type { ChatState } from "@commands/components/chat/state";
 

src/commands/components/chat/commands/commandsRegistry.ts

@@ -1,4 +1,4 @@
-import { saveSession } from "@services/session";
+import { saveSession } from "@services/core/session";
 import { clearConversation } from "@commands/components/chat/history/clear-conversation";
 import { appStore } from "@tui/index";
 import { showContextFiles } from "@commands/components/chat/context/show-context-files";
@@ -18,7 +18,7 @@ import { switchAgent } from "@commands/components/chat/agents/switch-agent";
 import { handleMCP } from "@commands/components/chat/mcp/handle-mcp";
 import { CommandContext } from "@interfaces/commandContext";
 import type { CommandHandler } from "@/types/commandHandler";
-import { successMessage } from "@utils/terminal";
+import { successMessage } from "@utils/core/terminal";
 
 const COMMAND_REGISTRY: Map<string, CommandHandler> = new Map<
   string,

src/commands/components/chat/commands/handle-command.ts

@@ -1,4 +1,4 @@
-import { warningMessage, infoMessage } from "@utils/terminal";
+import { warningMessage, infoMessage } from "@utils/core/terminal";
 import type { ChatState } from "@commands/components/chat/state";
 import COMMAND_REGISTRY from "@commands/components/chat/commands/commandsRegistry";
 

src/commands/components/chat/context/add-context-file.ts

@@ -1,7 +1,7 @@
 import { resolve } from "path";
 import { existsSync } from "fs";
 import fg from "fast-glob";
-import { errorMessage, warningMessage } from "@utils/terminal";
+import { errorMessage, warningMessage } from "@utils/core/terminal";
 import { loadFile } from "@commands/components/chat/context/load-file";
 import { IGNORE_FOLDERS } from "@constants/paths";
 

src/commands/components/chat/context/load-file.ts

@@ -1,7 +1,7 @@
 import { readFile, stat } from "fs/promises";
 import { basename } from "path";
-import { warningMessage, successMessage, errorMessage } from "@utils/terminal";
-import { addContextFile } from "@services/session";
+import { warningMessage, successMessage, errorMessage } from "@utils/core/terminal";
+import { addContextFile } from "@services/core/session";
 
 export const loadFile = async (
   filePath: string,

src/commands/components/chat/context/remove-file.ts

@@ -1,5 +1,5 @@
 import { basename } from "path";
-import { warningMessage, successMessage } from "@utils/terminal";
+import { warningMessage, successMessage } from "@utils/core/terminal";
 
 export const removeFile = (
   filename: string,

src/commands/components/chat/context/show-context-files.ts

@@ -1,7 +1,7 @@
 import chalk from "chalk";
 import { basename } from "path";
-import { getCurrentSession } from "@services/session";
-import { infoMessage, filePath } from "@utils/terminal";
+import { getCurrentSession } from "@services/core/session";
+import { infoMessage, filePath } from "@utils/core/terminal";
 
 export const showContextFiles = (contextFiles: Map<string, string>): void => {
   const session = getCurrentSession();

src/commands/components/chat/history/clear-conversation.ts

@@ -1,5 +1,5 @@
-import { clearMessages } from "@services/session";
-import { successMessage } from "@utils/terminal";
+import { clearMessages } from "@services/core/session";
+import { successMessage } from "@utils/core/terminal";
 import type { ChatState } from "@commands/components/chat/state";
 
 export const clearConversation = (state: ChatState): void => {

src/commands/components/chat/history/compact-history.ts

@@ -1,4 +1,4 @@
-import { successMessage, infoMessage } from "@utils/terminal";
+import { successMessage, infoMessage } from "@utils/core/terminal";
 import type { ChatState } from "@commands/components/chat/state";
 
 export const compactHistory = (state: ChatState): void => {

src/commands/components/chat/index.ts

@@ -1,13 +1,13 @@
 import chalk from "chalk";
-import { infoMessage, errorMessage, warningMessage } from "@utils/terminal";
+import { infoMessage, errorMessage, warningMessage } from "@utils/core/terminal";
 import {
   createSession,
   loadSession,
   getMostRecentSession,
   findSession,
   setWorkingDirectory,
-} from "@services/session";
-import { getConfig } from "@services/config";
+} from "@services/core/session";
+import { getConfig } from "@services/core/config";
 import type { Provider as ProviderName, ChatSession } from "@/types/index";
 import { getProvider, getProviderStatus } from "@providers/index.ts";
 import {

src/commands/components/chat/messages/send-message.ts

@@ -1,9 +1,9 @@
 import chalk from "chalk";
 import { basename, extname } from "path";
-import { addMessage } from "@services/session";
-import { initializePermissions } from "@services/permissions";
-import { createAgent } from "@services/agent";
-import { infoMessage, errorMessage, warningMessage } from "@utils/terminal";
+import { addMessage } from "@services/core/session";
+import { initializePermissions } from "@services/core/permissions";
+import { createAgent } from "@services/core/agent";
+import { infoMessage, errorMessage, warningMessage } from "@utils/core/terminal";
 import { getThinkingMessage } from "@constants/status-messages";
 import {
   detectDebuggingRequest,

src/commands/components/chat/models/show-providers.ts

@@ -1,4 +1,4 @@
-import { getConfig } from "@services/config";
+import { getConfig } from "@services/core/config";
 import { displayProvidersStatus } from "@providers/index.ts";
 
 export const showProviders = async (): Promise<void> => {

src/commands/components/chat/models/switch-model.ts

@@ -3,8 +3,8 @@ import {
   warningMessage,
   successMessage,
   errorMessage,
-} from "@utils/terminal";
-import { getConfig } from "@services/config";
+} from "@utils/core/terminal";
+import { getConfig } from "@services/core/config";
 import { getProvider } from "@providers/index.ts";
 import { showModels } from "./show-models.ts";
 import type { ChatState } from "../state.ts";

src/commands/components/chat/models/switch-provider.ts

@@ -4,8 +4,8 @@ import {
   warningMessage,
   infoMessage,
   successMessage,
-} from "@utils/terminal";
-import { getConfig } from "@services/config";
+} from "@utils/core/terminal";
+import { getConfig } from "@services/core/config";
 import {
   getProvider,
   getProviderStatus,

src/commands/components/chat/print-mode.ts

@@ -1,7 +1,7 @@
 import chalk from "chalk";
 import { basename, extname } from "path";
-import { initializePermissions } from "@services/permissions";
-import { createAgent } from "@services/agent";
+import { initializePermissions } from "@services/core/permissions";
+import { createAgent } from "@services/core/agent";
 import type { ChatState } from "@commands/components/chat/state";
 import { processFileReferences } from "@commands/components/chat/context/process-file-references";
 

src/commands/components/chat/session/list-sessions.ts

@@ -1,6 +1,6 @@
 import chalk from "chalk";
-import { getSessionSummaries } from "@services/session";
-import { infoMessage } from "@utils/terminal";
+import { getSessionSummaries } from "@services/core/session";
+import { infoMessage } from "@utils/core/terminal";
 
 export const listSessions = async (): Promise<void> => {
   const summaries = await getSessionSummaries();

src/commands/components/chat/session/show-session-info.ts

@@ -1,6 +1,6 @@
 import chalk from "chalk";
-import { getCurrentSession } from "@services/session";
-import { warningMessage } from "@utils/terminal";
+import { getCurrentSession } from "@services/core/session";
+import { warningMessage } from "@utils/core/terminal";
 
 export const showSessionInfo = async (): Promise<void> => {
   const session = getCurrentSession();

src/commands/components/chat/usage/show-usage.ts

@@ -3,11 +3,11 @@
  */
 
 import chalk from "chalk";
-import { usageStore } from "@stores/usage-store";
-import { getUserInfo } from "@providers/copilot/credentials";
+import { usageStore } from "@stores/core/usage-store";
+import { getUserInfo } from "@providers/copilot/auth/credentials";
 import { getCopilotUsage } from "@providers/copilot/usage";
 import { getProvider } from "@providers/index";
-import { renderUsageBar, renderUnlimitedBar } from "@utils/progress-bar";
+import { renderUsageBar, renderUnlimitedBar } from "@utils/menu/progress-bar";
 import type { ChatState } from "@commands/components/chat/state";
 import type { CopilotQuotaDetail } from "@/types/copilot-usage";
 

src/commands/components/dashboard/build-config.ts

@@ -3,7 +3,7 @@
  */
 
 import os from "os";
-import { getConfig } from "@services/config";
+import { getConfig } from "@services/core/config";
 import { DASHBOARD_TITLE } from "@constants/dashboard";
 import type { DashboardConfig } from "@/types/dashboard";
 

src/commands/components/execute/index.ts

@@ -13,14 +13,14 @@ import {
 import type { ChatServiceState } from "@services/chat-tui-service";
 import type { ChatTUIOptions } from "@interfaces/ChatTUIOptions";
 import type { AgentConfig } from "@/types/agent-config";
-import { getConfig } from "@services/config";
+import { getConfig } from "@services/core/config";
 import { getThinkingMessage } from "@constants/status-messages";
 import {
   enterFullscreen,
   registerExitHandlers,
   exitFullscreen,
   clearScreen,
-} from "@utils/terminal";
+} from "@utils/core/terminal";
 import { createCallbacks } from "@commands/chat-tui";
 import { agentLoader } from "@services/agent-loader";
 import { projectSetupService } from "@services/project-setup-service";

src/commands/core/handlers.ts

@@ -2,7 +2,7 @@
  * Command handlers - Route commands to appropriate implementations
  */
 
-import { errorMessage } from "@utils/terminal";
+import { errorMessage } from "@utils/core/terminal";
 import { COMMAND_REGISTRY, isValidCommand } from "@commands/handlers/registry";
 import type { CommandOptions } from "@/types/index";
 

src/commands/core/index.ts

@@ -0,0 +1,6 @@
+/**
+ * Commands Core - Main command handling
+ */
+
+export * from "./runner";
+export * from "./handlers";

src/commands/handlers/classify.ts

@@ -9,7 +9,7 @@ import {
   errorMessage,
   failSpinner,
   headerMessage,
-} from "@utils/terminal";
+} from "@utils/core/terminal";
 import {
   INTENT_KEYWORDS,
   CLASSIFICATION_CONFIDENCE,

src/commands/handlers/config.ts

@@ -9,8 +9,8 @@ import {
   hightLigthedJson,
   headerMessage,
   infoMessage,
-} from "@utils/terminal";
-import { getConfig } from "@services/config";
+} from "@utils/core/terminal";
+import { getConfig } from "@services/core/config";
 import {
   VALID_CONFIG_KEYS,
   VALID_PROVIDERS,

src/commands/handlers/plan.ts

@@ -12,7 +12,7 @@ import {
   startSpinner,
   succeedSpinner,
   successMessage,
-} from "@utils/terminal";
+} from "@utils/core/terminal";
 import type { CommandOptions } from "@/types/index";
 
 export const handlePlan = async (options: CommandOptions): Promise<void> => {

src/commands/handlers/run.ts

@@ -2,7 +2,7 @@
  * Run command handler
  */
 
-import { execute } from "@commands/runner";
+import { execute } from "@commands/core/runner";
 import type { CommandOptions } from "@/types/index";
 
 export const handleRun = async (options: CommandOptions): Promise<void> => {

src/commands/handlers/serve.ts

@@ -2,7 +2,7 @@
  * Serve command handler
  */
 
-import { boxMessage, warningMessage, infoMessage } from "@utils/terminal";
+import { boxMessage, warningMessage, infoMessage } from "@utils/core/terminal";
 import type { CommandOptions } from "@/types/index";
 import { SERVER_INFO } from "@constants/serve";
 

src/commands/handlers/validate.ts

@@ -12,8 +12,8 @@ import {
   errorMessage,
   headerMessage,
   filePath,
-} from "@utils/terminal";
-import { getConfig } from "@services/config";
+} from "@utils/core/terminal";
+import { getConfig } from "@services/core/config";
 import type { CommandOptions } from "@/types/index";
 
 export const handleValidate = async (

src/commands/mcp.ts

@@ -12,7 +12,7 @@
  */
 
 import chalk from "chalk";
-import { errorMessage, infoMessage, successMessage } from "@utils/terminal";
+import { errorMessage, infoMessage, successMessage } from "@utils/core/terminal";
 import {
   initializeMCP,
   getMCPConfig,

src/commands/runner/display-header.ts

@@ -3,7 +3,7 @@
  */
 
 import chalk from "chalk";
-import { headerMessage, filePath } from "@utils/terminal";
+import { headerMessage, filePath } from "@utils/core/terminal";
 import type { RunnerOptions } from "@/types/runner";
 
 export const displayHeader = (options: RunnerOptions): void => {

src/commands/runner/display-plan.ts

@@ -3,7 +3,7 @@
  */
 
 import chalk from "chalk";
-import { filePath } from "@utils/terminal";
+import { filePath } from "@utils/core/terminal";
 import { STEP_ICONS, DEFAULT_STEP_ICON } from "@constants/runner";
 import type { ExecutionPlan, PlanStep } from "@/types/index";
 

src/commands/runner/execute-plan.ts

@@ -2,7 +2,7 @@
  * Plan execution utilities
  */
 
-import { failSpinner, succeedSpinner, startSpinner } from "@utils/terminal";
+import { failSpinner, succeedSpinner, startSpinner } from "@utils/core/terminal";
 import { RUNNER_DELAYS } from "@constants/runner";
 import { getStepIcon } from "@commands/runner/display-plan";
 import { delay } from "@commands/runner/utils";

src/commands/runner/execute.ts

@@ -12,7 +12,7 @@ import {
   infoMessage,
   errorMessage,
   warningMessage,
-} from "@utils/terminal";
+} from "@utils/core/terminal";
 import { RUNNER_DELAYS, RUNNER_MESSAGES } from "@constants/runner";
 import { displayHeader } from "@commands/runner/display-header";
 import { displayPlan } from "@commands/runner/display-plan";