diff --git a/lua/codetyper/adapters/nvim/autocmds.lua b/lua/codetyper/adapters/nvim/autocmds.lua
index 676fd1d..56f6482 100644
--- a/lua/codetyper/adapters/nvim/autocmds.lua
+++ b/lua/codetyper/adapters/nvim/autocmds.lua
@@ -727,7 +727,7 @@ end
 --- Check for closed prompt with preference check
 --- If user hasn't chosen auto/manual mode, ask them first
 function M.check_for_closed_prompt_with_preference()
-	local preferences = require("codetyper.preferences")
+	local preferences = require("codetyper.config.preferences")
 	local parser = require("codetyper.parser")
 
 	-- First check if there are any prompts to process
@@ -767,7 +767,7 @@ end
 
 --- Check all prompts with preference check
 function M.check_all_prompts_with_preference()
-	local preferences = require("codetyper.preferences")
+	local preferences = require("codetyper.config.preferences")
 	local parser = require("codetyper.parser")
 
 	-- First check if there are any prompts to process
diff --git a/lua/codetyper/adapters/nvim/commands.lua b/lua/codetyper/adapters/nvim/commands.lua
index d1f0878..1c6e8c2 100644
--- a/lua/codetyper/adapters/nvim/commands.lua
+++ b/lua/codetyper/adapters/nvim/commands.lua
@@ -844,11 +844,11 @@ local function coder_cmd(args)
       cmd_forget(args.fargs[2])
     end,
     ["auto-toggle"] = function()
-      local preferences = require("codetyper.preferences")
+      local preferences = require("codetyper.config.preferences")
       preferences.toggle_auto_process()
     end,
     ["auto-set"] = function(args)
-      local preferences = require("codetyper.preferences")
+      local preferences = require("codetyper.config.preferences")
       local arg = (args[1] or ""):lower()
       if arg == "auto" or arg == "automatic" or arg == "on" then
         preferences.set_auto_process(true)
@@ -1104,12 +1104,12 @@ function M.setup()
 
   -- Preferences commands
   vim.api.nvim_create_user_command("CoderAutoToggle", function()
-    local preferences = require("codetyper.preferences")
+    local preferences = require("codetyper.config.preferences")
     preferences.toggle_auto_process()
   end, { desc = "Toggle automatic/manual prompt processing" })
 
   vim.api.nvim_create_user_command("CoderAutoSet", function(opts)
-    local preferences = require("codetyper.preferences")
+    local preferences = require("codetyper.config.preferences")
     local arg = opts.args:lower()
     if arg == "auto" or arg == "automatic" or arg == "on" then
       preferences.set_auto_process(true)
diff --git a/tests/spec/preferences_spec.lua b/tests/spec/preferences_spec.lua
index 5574060..acaa7e1 100644
--- a/tests/spec/preferences_spec.lua
+++ b/tests/spec/preferences_spec.lua
@@ -14,7 +14,7 @@ describe("preferences", function()
 		package.loaded["codetyper.preferences"] = nil
 		package.loaded["codetyper.utils"] = nil
 
-		preferences = require("codetyper.preferences")
+		preferences = require("codetyper.config.preferences")
 		utils = require("codetyper.utils")
 
 		-- Clear cache before each test